Pharmacogenomics: Methods and Protocols / Edition 1

Pharmacogenomics: Methods and Protocols / Edition 1

by Federico Innocenti
ISBN-10:
1588294404
ISBN-13:
9781588294401
Pub. Date:
08/15/2005
Publisher:
Springer-Verlag New York, LLC
ISBN-10:
1588294404
ISBN-13:
9781588294401
Pub. Date:
08/15/2005
Publisher:
Springer-Verlag New York, LLC
Pharmacogenomics: Methods and Protocols / Edition 1

Pharmacogenomics: Methods and Protocols / Edition 1

by Federico Innocenti
$109.99
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Overview

Expert researchers and physician/clinicians describe in detail the newest and most commonly used technologies today in this rapidly advancing field. The authors provide readily reproducible methods for assessing the functional consequences of a certain polymorphism, evaluate the variety of genotyping platforms currently available, and discuss the management of pharmacogenomic information. Highlights include techniques for making a snapshot of the allele-specific variation in human gene expression, genome wide analysis of allele-specific expression using oligo microarrays, in vivo assays with HaploChIP, SNP genotyping in DNA pools, and PharmGKB, the pharmacogenetics and pharmacogenomics knowledge base. The methodologies for genotyping include denaturing high-performance liquid chromarography, pyrosequencing, kinetic-fluorescence detection, mass spectrometry, and TaqMan assay for insertion/deletions.

Product Details

ISBN-13: 9781588294401
Publisher: Springer-Verlag New York, LLC
Publication date: 08/15/2005
Series: Methods in Molecular Biology , #311
Edition description: 2005
Pages: 214
Product dimensions: 6.10(w) x 9.25(h) x 0.03(d)

Table of Contents

History and Overview.- Pharmacogenomics.- Functional Analysis of Gene Variation.- Transfection Assays With Allele-Specific Constructs.- Snapshot of the Allele-Specific Variation in Human Gene Expression.- Genome-Wide Analysis of Allele-Specific Gene Expression Using Oligo Microarrays.- HaploChIP.- Genotyping Techniques.- Aspects Influencing Genotyping Method Selection.- Denaturing High-Performance Liquid Chromatography for Mutation Detection and Genotyping.- Pyrosequencing of Clinically Relevant Polymorphisms.- Kinetic Fluorescence-Quenching Detection Assay for Allele Frequency Estimation.- Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry.- Fluorescence-Based Fragment Size Analysis.- Single-Nucleotide Polymorphism Genotyping in DNA Pools.- TaqMan Genotyping of Insertion/Deletion Polymorphisms.- Management of Pharmacogenomic Information.- PharmGKB.- Systems for the Management of Pharmacogenomic Information.
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