Information Retrieval In Biomedicine

Information Retrieval In Biomedicine

by Violaine Prince
     
 

ISBN-10: 1605662747

ISBN-13: 9781605662749

Pub. Date: 05/05/2011

Publisher: IGI Global

Today, there is an intense interest for bio natural language processing (NLP) creating a need among researchers, academicians, and practitioners for a comprehensive publication of articles in this area. Information Retrieval in Biomedicine: Natural Language Processing for Knowledge Integration provides relevant theoretical frameworks and the latest empirical

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Overview

Today, there is an intense interest for bio natural language processing (NLP) creating a need among researchers, academicians, and practitioners for a comprehensive publication of articles in this area. Information Retrieval in Biomedicine: Natural Language Processing for Knowledge Integration provides relevant theoretical frameworks and the latest empirical research findings in this area according to a linguistic granularity. As a critical mass of advanced knowledge, this book presents original applications, going beyond existing publications while opening up the road for a broader use of NLP in biomedicine.

Product Details

ISBN-13:
9781605662749
Publisher:
IGI Global
Publication date:
05/05/2011
Pages:
462
Product dimensions:
8.30(w) x 11.30(h) x 1.40(d)

Table of Contents

Ch. I Text Mining for Biomedicine Sophia Ananiadou Ananiadou, Sophia 1

Sect. I Works at a Lexical Level: Crossroads Between NLP and Ontological Knowledge Management

Ch. II Lexical Granularity for Automatic Indexing and Means to Achieve It: The Case of Swedish MeSH Dimitrios Kokkinakis Kokkinakis, Dimitrios 11

Ch. III Expanding Terms with Medical Ontologies to Improve a Multi-Label Text Categorization System M. Teresa Martin-Valdivia Martin-Valdivia, M. Teresa Arturo Montejo-Raez Montejo-Raez, Arturo M. C. Diaz-Galiano Diaz-Galiano, M. C. Jose M. Perea Ortega Ortega, Jose M. Perea L. Alfonso Urena-Lopez Urena-Lopez, L. Alfonso 38

Ch. IV Using Biomedical Terminological Resources for Information Retrieval Piotr Pezik Pezik, Piotr Antonio Jimeno Yepes Yepes, Antonio Jimeno Dietrich Rebholz-Schuhmann Rebholz-Schuhmann, Dietrich 58

Ch. V Automatic Alignment of Medical Terminologies with General Dictionaries for an Efficient Information Retrieval Laura Diosan Diosan, Laura Alexandrina Rogozan Rogozan, Alexandrina Jean-Pierre Pecuchet Pecuchet, Jean-Pierre 78

Ch. VI Translation of Biomedical Terms by Inferring Rewriting Rules Vincent Claveau Claveau, Vincent 106

Ch. VII Lexical Enrichment of Biomedical Ontologies Nils Reiter Reiter, Nils Paul Buitelaar Buitelaar, Paul 124

Ch. VIII Word Sense Disambiguation in Biomedical Applications: A Machine Learning Approach Torsten Schiemann Schiemann, Torsten Ulf Leser Leser, Ulf Jorg Hakenberg Hakenberg, Jorg 142

Sect. II Going Beyond Words: NLP Approaches Involving the Sentence Level

Ch. IX Information Extraction of Protein Phosphorylation from Biomedical Literature M. Narayanaswamy Narayanaswamy, M. K. E. RavikumarRavikumar, K. E. Z. Z. Hu Hu, Z. Z. K. Vijay-Shanker Vijay-Shanker, K. C. H. Wu Wu, C. H. 163

Ch. X Cor'Tag: A Language for a Contextual Tagging of the Words Within Their Sentence Yves Kodratoff Kodratoff, Yves Jerome Aze Aze, Jerome Lise Fontaine Fontaine, Lise 177

Ch. XI Analyzing the Text of Clinical Literature for Question Answering Yun Niu Niu, Yun Graeme Hirst Hirst, Graeme 190

Sect. III Pragmatics, Discourse Structures and Segment Level as the Last Stage in the NLP Offer to Biomedicine

Ch. XII Discourse Processing for Text Mining Nadine Lucas Lucas, Nadine 222

Ch. XIII A Neural Network Approach Implementing Non-Linear Relevance Feedback to Improve the Performance of Medical Information Retrieval Systems Dimosthenis Kyriazis Kyriazis, Dimosthenis Anastasios Doulamis Doulamis, Anastasios Theodora Varvarigou Varvarigou, Theodora 255

Ch. XIV Extracting Patient Case Profiles with Domain-Specific Semantic Categories Yitao Zhang Zhang, Yitao Jon Patrick Patrick, Jon 273

Sect. IV NLP Software for IR in Biomedicine

Ch. XV Identification of Sequence Variants of Genes from Biomedical Literature: The OSIRIS Approach Laura I. Furlong Furlong, Laura I. Ferran Sanz Sanz, Ferran 289

Ch. XVI Verification of Uncurated Protein Annotations Francisco M. Couto Couto, Francisco M. Mario J. Silva Silva, Mario J. Vivian Lee Lee, Vivian Emily Dimmer Dimmer, Emily Evelyn Camon Camon, Evelyn Rolf Apweiler Apweiler, Rolf Harald Kirsch Kirsch, Harald Dietrich Rebholz-Schuhmann Rebholz-Schuhmann, Dietrich 301

Ch. XVII A Software Tool for Biomedical Information Extraction (And Beyond) Burr Settles Settles, Burr 315

Ch. XVIII Problems-Solving Map Extraction with Collective Intelligence Analysis and Langauge Engineering Asanee Kawtrakul Kawtrakul, Asanee Chaveevarn Pechsiri Pechsiri, Chaveevarn Sachit Rajbhandari Rajbhandari, Sachit Frederic Andres Andres, Frederic 325

Ch. XIX Seekbio: Retrieval of Spatial Relations for System Biology Christophe Jouis Jouis, Christophe Magali Roux-Rouquie Roux-Rouquie, Magali Jean-Gabriel Ganascia Ganascia, Jean-Gabriel 344

Sect. V Conclusion and Perspectives

Ch. XX Analysing Clinical Notes for Translation Research: Back to the Future Jon Patrick Patrick, Jon Pooyan Asgari Asgari, Pooyan 357

Compilation of References 378

About the Contributors 414

Index 425

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