This monograph, "Non-linear Cooperative Effects in Open Quantum Systems: Entanglement and Second Order Coherence" is dedicated to the large auditory of specialists interested in the modern approaches in quantum open systems, cooperative phenomena between excited atoms and the field of the non-linear interaction. Special attention is dedicated to the problems of non-linear interaction with vacuum fields and thermostat with finite temperature, but quantum aspects of laser generation of light in non-linear interaction with finite numbers of cavity modes remain the center of attention. In many situations, the limit to the traditional cooperative phenomena of open quantum systems and thermodynamics are taken into consideration. As the book contains the class of non-linear effects of generations of the particle in such cooperative phenomena, the author's aim was to describe squeezed problems and affect entanglement between the generation photons and phonons in cooperative processes. The new phenomenon of cooperative emission in the single- and two-quantum processes are carefully described for large audiences of specialists in the field of quantum optics and condensed matter physics, chemistry and biology.