| Preface | xiii |
| How to Read This Book | xiv |
| Dealing with Difficult Subjects | xv |
| Personal Motivation | xvi |
| Acknowledgments | xvi |
| 1 | Introduction | 1 |
| 1.1 | Simplicity and Complexity | 2 |
| 1.2 | The Convergence of the Sciences | 5 |
| 1.3 | The Silicon Laboratory | 6 |
| I | Computation | 9 |
| 2 | Number Systems and Infinity | 11 |
| 2.1 | Introduction to Number Properties | 12 |
| 2.2 | Counting Numbers | 14 |
| 2.3 | Rational Numbers | 15 |
| 2.4 | Irrational Numbers | 16 |
| 2.5 | Further Reading | 22 |
| 3 | Computability and Incomputability | 23 |
| 3.1 | Godelization | 25 |
| 3.2 | Models of Computation | 26 |
| 3.3 | Lisp and Stutter | 30 |
| 3.4 | Equivalence and Time Complexity | 36 |
| 3.5 | Universal Computation and Decision Problems | 40 |
| 3.6 | Incomputability | 42 |
| 3.7 | Number Sets Revisited | 45 |
| 3.8 | Further Reading | 48 |
| 4 | Postscript: Computation | 51 |
| 4.1 | Godel's Incompleteness Result | 52 |
| 4.2 | Incompleteness versus Incomputability | 53 |
| 4.3 | Discrete versus Continuous | 55 |
| 4.4 | Incomputability versus Computability | 56 |
| 4.5 | Further Reading | 57 |
| II | Fractals | 59 |
| 5 | Self-Similarity and Fractal Geometry | 61 |
| 5.1 | The Cantor Set | 62 |
| 5.2 | The Koch Curve | 65 |
| 5.3 | The Peano Curve | 66 |
| 5.4 | Fractional Dimensions | 67 |
| 5.5 | Random Fractals in Nature and Brownian Motion | 71 |
| 5.6 | Further Exploration | 75 |
| 5.7 | Further Reading | 76 |
| 6 | L-Systems and Fractal Growth | 77 |
| 6.1 | Production Systems | 78 |
| 6.2 | Turtle Graphics | 80 |
| 6.3 | Further Exploration | 81 |
| 6.4 | Further Reading | 92 |
| 7 | Affine Transformation Fractals | 93 |
| 7.1 | A Review of Linear Algebra | 94 |
| 7.2 | Composing Affine Linear Operations | 96 |
| 7.3 | The Multiple Reduction Copy Machine Algorithm | 98 |
| 7.4 | Iterated Functional Systems | 103 |
| 7.5 | Further Exploration | 105 |
| 7.6 | Further Reading | 106 |
| 8 | The Mandelbrot Set and Julia Sets | 111 |
| 8.1 | Iterative Dynamical Systems | 112 |
| 8.2 | Complex Numbers | 112 |
| 8.3 | The Mandelbrot Set | 114 |
| 8.4 | The M-Set and Computability | 118 |
| 8.5 | The M-Set as the Master Julia Set | 120 |
| 8.6 | Other Mysteries of the M-Set | 125 |
| 8.7 | Further Exploration | 125 |
| 8.8 | Further Reading | 127 |
| 9 | Postscript: Fractals | 129 |
| 9.1 | Algorithmic Regularity as Simplicity | 130 |
| 9.2 | Stochastic Irregularity as Simplicity | 132 |
| 9.3 | Effective Complexity | 134 |
| 9.4 | Further Reading | 136 |
| III | Chaos | 137 |
| 10 | Nonlinear Dynamics in Simple Maps | 139 |
| 10.1 | The Logistic Map | 141 |
| 10.2 | Stability and Instability | 144 |
| 10.3 | Bifurcations and Universality | 148 |
| 10.4 | Prediction, Layered Pastry, and Information Loss | 150 |
| 10.5 | The Shadowing Lemma | 153 |
| 10.6 | Characteristics of Chaos | 154 |
| 10.7 | Further Exploration | 156 |
| 10.8 | Further Reading | 158 |
| 11 | Strange Attractors | 159 |
| 11.1 | The Henon Attractor | 160 |
| 11.2 | A Brief Introduction to Calculus | 165 |
| 11.3 | The Lorenz Attractor | 168 |
| 11.4 | The Mackey-Glass System | 173 |
| 11.5 | Further Exploration | 176 |
| 11.6 | Further Reading | 180 |
| 12 | Producer-Consumer Dynamics | 181 |
| 12.1 | Producer-Consumer Interactions | 182 |
| 12.2 | Predator-Prey Systems | 183 |
| 12.3 | Generalized Lotka-Volterra Systems | 186 |
| 12.4 | Individual-Based Ecology | 187 |
| 12.5 | Unifying Themes | 197 |
| 12.6 | Further Exploration | 198 |
| 12.7 | Further Reading | 201 |
| 13 | Controlling Chaos | 203 |
| 13.1 | Taylor Expansions | 204 |
| 13.2 | Vector Calculus | 205 |
| 13.3 | Inner and Outer Vector Product | 207 |
| 13.4 | Eigenvectors, Eigenvalues, and Basis | 209 |
| 13.5 | OGY Control | 211 |
| 13.6 | Controlling the Henon Map | 215 |
| 13.7 | Further Exploration | 218 |
| 13.8 | Further Reading | 219 |
| 14 | Postscript: Chaos | 221 |
| 14.1 | Chaos and Randomness | 222 |
| 14.2 | Randomness and Incomputability | 224 |
| 14.3 | Incomputability and Chaos | 226 |
| 14.4 | Further Reading | 227 |
| IV | Complex Systems | 229 |
| 15 | Cellular Automata | 231 |
| 15.1 | One-Dimensional CA | 232 |
| 15.2 | Wolfram's CA Classification | 236 |
| 15.3 | Langton's Lambda Parameter | 242 |
| 15.4 | Conway's Game of Life | 245 |
| 15.5 | Natural CA-like Phenomena | 251 |
| 15.6 | Further Exploration | 255 |
| 15.7 | Further Reading | 258 |
| 16 | Autonomous Agents and Self-Organization | 261 |
| 16.1 | Termites | 262 |
| 16.2 | Virtual Ants | 264 |
| 16.3 | Flocks, Herds, and Schools | 270 |
| 16.4 | Unifying Themes | 275 |
| 16.5 | Further Exploration | 276 |
| 16.6 | Further Reading | 278 |
| 17 | Competition and Cooperation | 281 |
| 17.1 | Game Theory and Zero-Sum Games | 282 |
| 17.2 | Nonzero-Sum Games and Dilemmas | 288 |
| 17.3 | Iterated Prisoner's Dilemma | 293 |
| 17.4 | Stable Strategies and Other Considerations | 295 |
| 17.5 | Ecological and Spatial Worlds | 297 |
| 17.6 | Final Thoughts | 303 |
| 17.7 | Further Exploration | 303 |
| 17.8 | Further Reading | 304 |
| 18 | Natural and Analog Computation | 307 |
| 18.1 | Artificial Neural Networks | 309 |
| 18.2 | Associative Memory and Hebbian Learning | 312 |
| 18.3 | Recalling Letters | 316 |
| 18.4 | Hopfield Networks and Cost Optimization | 318 |
| 18.5 | Unifying Themes | 324 |
| 18.6 | Further Exploration | 325 |
| 18.7 | Further Reading | 326 |
| 19 | Postscript: Complex Systems | 327 |
| 19.1 | Phase Transitions in Networks | 328 |
| 19.2 | Phase Transitions in Computation | 332 |
| 19.3 | Phase Transitions and Criticality | 334 |
| 19.4 | Further Reading | 336 |
| V | Adaptation | 337 |
| 20 | Genetics and Evolution | 339 |
| 20.1 | Biological Adaptation | 340 |
| 20.2 | Heredity as Motivation for Simulated Evolution | 342 |
| 20.3 | Details of a Genetic Algorithm | 343 |
| 20.4 | A Sampling of GA Encodings | 348 |
| 20.5 | Schemata and Implicit Parallelism | 353 |
| 20.6 | Other Evolutionary Inspirations | 355 |
| 20.7 | Unifying Themes | 356 |
| 20.8 | Further Exploration | 358 |
| 20.9 | Further Reading | 360 |
| 21 | Classifier Systems | 361 |
| 21.1 | Feedback and Control | 363 |
| 21.2 | Production, Expert, and Classifier Systems | 364 |
| 21.3 | The Zeroth Level Classifier System | 370 |
| 21.4 | Experiments with ZCS | 373 |
| 21.5 | Further Exploration | 379 |
| 21.6 | Further Reading | 380 |
| 22 | Neural Networks and Learning | 383 |
| 22.1 | Pattern Classification and the Perceptron | 385 |
| 22.2 | Linear Inseparability | 390 |
| 22.3 | Multilayer Perceptrons | 392 |
| 22.4 | Backpropagation | 393 |
| 22.5 | Function Approximation | 398 |
| 22.6 | Internal Representations | 404 |
| 22.7 | Other Applications | 409 |
| 22.8 | Unifying Themes | 410 |
| 22.9 | Further Exploration | 411 |
| 22.10 | Further Reading | 413 |
| 23 | Postscript: Adaptation | 415 |
| 23.1 | Models and Search Methods | 416 |
| 23.2 | Search Methods and Environments | 419 |
| 23.3 | Environments and Models | 422 |
| 23.4 | Adaptation and Computation | 423 |
| 23.5 | Further Reading | 424 |
| Epilogue | 425 |
| 24 | Duality and Dichotomy | 427 |
| 24.1 | Web of Connections | 428 |
| 24.2 | Interfaces to Hierarchies | 429 |
| 24.3 | Limitations on Knowledge | 431 |
| Source Code Notes | 435 |
| Glossary | 443 |
| Bibliography | 469 |
| Index | 483 |