Agent-Based and Individual-Based Modeling: A Practical Introduction, Second Edition

Agent-Based and Individual-Based Modeling: A Practical Introduction, Second Edition

by Steven F. Railsback, Volker Grimm
Agent-Based and Individual-Based Modeling: A Practical Introduction, Second Edition

Agent-Based and Individual-Based Modeling: A Practical Introduction, Second Edition

by Steven F. Railsback, Volker Grimm

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Overview

The essential textbook on agent-based modeling—now fully updated and expanded

Agent-Based and Individual-Based Modeling has become the standard textbook on the subject for classroom use and self-instruction. Drawing on the latest version of NetLogo and fully updated with new examples, exercises, and an enhanced text for easier comprehension, this is the essential resource for anyone seeking to understand how the dynamics of biological, social, and other complex systems arise from the characteristics of the agents that make up these systems.

Steven Railsback and Volker Grimm lead students stepwise through the processes of designing, programming, documenting, and doing scientific research with agent-based models, focusing on the adaptive behaviors that make these models necessary. They cover the fundamentals of modeling and model analysis, introduce key modeling concepts, and demonstrate how to implement them using NetLogo. They also address pattern-oriented modeling, an invaluable strategy for modeling real-world problems and developing theory.

This accessible and authoritative book focuses on modeling as a tool for understanding real complex systems. It explains how to pose a specific question, use observations from actual systems to design models, write and test software, and more.

  • A hands-on introduction that guides students from conceptual design to computer implementation to analysis
  • Filled with new examples and exercises and compatible with the latest version of NetLogo
  • Ideal for students and researchers across the natural and social sciences
  • Written by two leading practitioners
  • Supported by extensive instructional materials at www.railsback-grimm-abm-book.com

Product Details

ISBN-13: 9780691190044
Publisher: Princeton University Press
Publication date: 03/26/2019
Sold by: Barnes & Noble
Format: eBook
Pages: 360
File size: 8 MB

About the Author

Steven F. Railsback is adjunct professor of mathematics at Humboldt State University and a consulting environmental scientist. Volker Grimm is senior scientist in the Department of Ecological Modeling at the Helmholtz Centre for Environmental Research – UFZ in Leipzig and professor of theoretical ecology at the University of Potsdam.

Table of Contents

Preface xi

Acknowledgments xvii

Part I Agent-Based Modeling and NetLogo Basics 1

1 Models, Agent-Based Models, and the Modeling Cycle 3

1.1 Introduction, Motivation, and Objectives 3

1.2 What Is a Model? 4

1.3 What Does the Modeling Cycle Involve? 7

1.4 What Is Agent-Based Modeling? How Is It Different? 10

1.5 Summary and Conclusions 12

1.6 Exercises 13

2 Getting Started with Net Logo 15

2.1 Introduction and Objectives 15

2.2 A Quick Tour of NetLogo 16

2.3 A Demonstration Program: Mushroom Hunt 18

2.4 Summary and Conclusions 29

2.5 Exercises 32

3 Describing and Formulating ABMs: The ODD Protocol 35

3.1 Introduction and Objectives 35

3.2 What Is ODD and Why Use It? 36

3.3 The ODD Protocol 37

3.4 Our First Example: Virtual Corridors of Butterflies 43

3.5 Summary and Conclusions 46

3.6 Exercises 47

4 Implementing a First Agent-Based Model 49

4.1 Introduction and Objectives 49

4.2 ODD and NetLogo 49

4.3 Butterfly Hilltopping: From ODD to NetLogo 50

4.4 Comments and the Full Program 57

4.5 Summary and Conclusions 60

4.6 Exercises 61

5 From Animations to Science 63

5.1 Introduction and Objectives 63

5.2 Observation of Corridors 64

5.3 Analyzing the Model 69

5.4 Time-Series Results: Adding Plots and File Output 69

5.5 A Real Landscape 71

5.6 Summary and Conclusions 74

5.7 Exercises 75

6 Testing Your Program 77

6.1 Introduction and Objectives 77

6.2 Common Kinds of Errors 78

6.3 Techniques for Debugging and Testing NetLogo Programs 81

6.4 Documentation of Tests 91

6.5 An Example and Exercise: The Culture Dissemination Model 92

6.6 Summary and Conclusions 94

6.7 Exercises 95

Part II Model Design Concepts 97

7 Introduction to Part II 99

7.1 Objectives of Part II 99

7.2 Overview of Part II 100

8 Emergence 103

8.1 Introduction and Objectives 103

8.2 A Model with Less Emergent Dynamics 104

8.3 Simulation Experiments and BehaviorSpace 105

8.4 A Model with Complex Emergent Dynamics 111

8.5 Summary and Conclusions 116

8.6 Exercises 116

9 Observation 119

9.1 Introduction and Objectives 119

9.2 Observing the Model via NetLogo's View 120

9.3 Other Interface Displays 123

9.4 File Output 124

9.5 BehaviorSpace as an Output Writer 128

9.6 Export Primitives and Menu Commands 128

9.7 Summary and Conclusions 129

9.8 Exercises 129

10 Sensing 131

10.1 Introduction and Objectives 131

10.2 Who Knows What: The Scope of Variables 132

10.3 Using Variables of Other Objects 135

10.4 Putting Sensing to Work: The Business Investor Model 136

10.5 Summary and Conclusions 145

10.6 Exercises 146

11 Adaptive Behavior and Objectives 149

11.1 Introduction and Objectives 149

11.2 Identifying and Optimizing Alternatives in NetLogo 150

11.3 Adaptive Behavior in the Business Investor Model 154

11.4 Nonoptimizing Adaptive Behavior: A Satisficing Example 155

11.5 The Objective Function 158

11.6 Summary and Conclusions 159

11.7 Exercises 160

12 Prediction 161

12.1 Introduction and Objectives 161

12.2 Example Effects of Prediction: The Business Investor Model's Time Horizon 162

12.3 Implementing and Analyzing Submodels 164

12.4 Analyzing the Investor Utility Function 167

12.5 Modeling Prediction Explicitly 169

12.6 Summary and Conclusions 170

12.7 Exercises 171

13 Interaction 173

13.1 Introduction and Objectives 173

13.2 Programming Interaction in NetLogo 174

13.3 The Telemarketer Model 175

13.4 The March of Progress: Global Interaction 180

13.5 Direct Interaction: Mergers in the Telemarketer Model 180

13.6 The Customers Fight Back: Remembering Who Called 182

13.7 Summary and Conclusions 185

13.8 Exercises 186

14 Scheduling 189

14.1 Introduction and Objectives 189

14.2 Modeling Time in NetLogo 190

14.3 Summary and Conclusions 198

14.4 Exercises 199

15 Stochasticity 201

15.1 Introduction and Objectives 201

15.2 Stochasticity in ABMs 202

15.3 Pseudorandom Number Generation in NetLogo 204

15.4 An Example Stochastic Process: Empirical Model of Behavior 210

15.5 Summary and Conclusions 211

15.6 Exercises 213

16 Collectives 215

16.1 Introduction and Objectives 215

16.2 What Are Collectives? 216

16.3 Modeling Collectives in NetLogo 216

16.4 Example: A Wild Dog Model with Packs 218

16.5 Summary and Conclusions 228

16.6 Exercises 229

Part III Pattern-Oriented Modeling 231

17 Introduction to Part III 233

17.1 Toward Structurally Realistic Models 233

17.2 Single and Multiple, Strong and Weak Patterns 234

17.3 Overview of Part III 236

18 Patterns for Model Structure 239

18.1 Introduction and Objectives 239

18.2 Steps in POM to Design Model Structure 240

18.3 Example: Modeling European Beech Forests 241

18.4 Example: Management Accounting and Collusion 245

18.5 Summary and Conclusions 246

18.6 Exercises 247

19 Theory Development 249

19.1 Introduction and Objectives 249

19.2 Theory Development and Strong Inference in the Virtual Laboratory 250

19.3 Examples of Theory Development for ABMs 252

19.4 Exercise Example: Stay or Leave? 255

19.5 Summary and Conclusions 259

19.6 Exercises 260

20 Parameterization and Calibration 263

20.1 Introduction and Objectives 263

20.2 Parameterization of ABMs Is Different 264

20.3 Parameterizing Submodels 265

20.4 Calibration Concepts and Strategies 266

20.5 Example: Calibration of the Woodhoopoe Model 272

20.6 Summary and Conclusions 275

20.7 Exercises 276

Part IV Model Analysis 279

21 Introduction to Part IV 281

21.1 Objectives of Part IV 281

21.2 Overview of Part IV 282

22 Analyzing and Understanding ABMs 285

22.1 Introduction and Objectives 285

22.2 Example Analysis: The Segregation Model 286

22.3 Additional Heuristics for Understanding ABMs 291

22.4 Statistics for Understanding 295

22.5 Summary and Conclusions 296

22.6 Exercises 297

23 Sensitivity, Uncertainty, and Robustness Analysis 299

23.1 Introduction and Objectives 299

23.2 Sensitivity Analysis 301

23.3 Uncertainty Analysis 307

23.4 Robustness Analysis 312

23.5 Summary and Conclusions 313

23.6 Exercises 314

24 Where to Go from Here 317

24.1 Introduction and Objectives 317

24.2 Keeping Your Momentum: Reimplementation 318

24.3 Your First Model from Scratch 318

24.4 Modeling Agent Behavior 319

24.5 ABM Gadgets 320

24.6 NetLogo as a Platform for Large Models 321

24.7 An Odd Farewell 323

References 325

Index 333

Index of Programming Notes 339

What People are Saying About This

From the Publisher

Praise for the first edition

"Biologists . . . have been relatively slow to take advantage of enhanced computing power and unlock the potential of these techniques. This book removes any excuse."Frontiers of Biogeography

"This volume would be an excellent text for an introductory course in modeling as science, or for self-study by a mature researcher interested in learning about this important new way of doing science."—H. Van Dyke Parunak, JASSS

"This book represents something I have been [awaiting] for some years now: a good and solid introduction to the field of individual- and agent-based models. . . . The book is not only a practical guide but also serves as a good introduction to the basics of 'healthy' programming. These authors are the right ones to do this as they have a strong background in the philosophical aspects as well as the practical issues of modelling."Basic and Applied Ecology

"Agent-Based and Individual-Based Modeling has the potential to foster an appreciation of the value and place of individual-based models in our field in the next generation of emerging ecologists."—Christopher X. Jon Jensen, Ecology

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