Practical Guide to ChIP-seq Data Analysis

Practical Guide to ChIP-seq Data Analysis

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Product Details

ISBN-13: 9781138596528
Publisher: Taylor & Francis
Publication date: 11/02/2018
Series: Focus Computational Biology Series
Pages: 112
Product dimensions: 5.50(w) x 8.50(h) x (d)

About the Author

Borbala Mifsud is an assistant professor in Epigenomics at the Hamad Bin Khalifa University, Doha, Qatar. She is a computational biologist with a background in molecular biology and works on 3D chromatin conformation and the integration of epigenomic data.

Kathi Zarnack is a principal investigator in Computational RNA Biology at the Buchmann Institute for Molecular Life Sciences (BMLS), Goethe University Frankfurt, Germany. She is a computational biologist with a background in molecular biology and broad experience in analysing high-throughput sequencing data.

Anaïs F Bardet is a tenured researcher at the National Center for Scientific Research (CNRS) at the University of Strasbourg, France. She is a computational biologist and develops projects exploring the regulation of transcription factor binding.

Table of Contents

Chapter 1 Introduction to ChIP-seq

Chapter 2 Getting Started

Chapter 3 General Quality Control

Chapter 4 Genomic Alignment

Chapter 5 ChIP-seq-specific Quality Control

Chapter 6 Peak Calling

Chapter 7 Data visualisation

Chapter 8 Comparative Analysis

Chapter 9 Downstream Analyses

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